The detailed information of tRNA gene sequence


Sequence ID>WENV170978391
Genome IDMTKZ01049154
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12229
End posion on genome 12153
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gggccctcgc
tRNA gene sequence 
GGGGTCGTAGTTCAGCTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
cttcttagtt
Secondary structure (Cloverleaf model)
>WENV170978391	Asp	GTC
                   c      GCCA cttcttagtt
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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