The detailed information of tRNA gene sequence


Sequence ID>WENV170978393
Genome IDMTKZ01049276
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1611
End posion on genome 1535
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gagatttacc
tRNA gene sequence 
GGGGGTTTAGCTCAGTTGGCTAGAGCGTTTGACTGGCAGTCAAAAGGTCAGGAGTTCGAT
TCTCCTAATCTCCACCC
Downstream region at tRNA end position 
tgacacaagg
Secondary structure (Cloverleaf model)
>WENV170978393	Ala	GGC
                   c      ACCC tgacacaagg
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     T - A          T T
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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