The detailed information of tRNA gene sequence


Sequence ID>WENV170978394
Genome IDMTKZ01049316
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2011
End posion on genome 1920
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tccttttacc
tRNA gene sequence 
GGGAATGGTAAAGTCCCGGTGGGCTTCCTGGTCTTCAAAATCAGTGTCGGGTCGGTAAGA
GCCGTCGTGGGTTCGACTCCCATCCATTCCCGttt
Downstream region at tRNA end position 
tttatgggaa
Secondary structure (Cloverleaf model)
>WENV170978394	SeC	TCA
                   c      Gttt tttatgggaa
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        A      + | | | |     G
    G       T G A A       G T G G G     C
    G       + | | |                 T T
    T       G C T T
      G G          C     TGTCGGGTCGGTAAGAGCCGTC
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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