The detailed information of tRNA gene sequence


Sequence ID>WENV170978397
Genome IDMTKZ01049334
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1001
End posion on genome 928
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaaattataa
tRNA gene sequence 
GGGGTCGTAGTGTAGCGGTTCAACACGCCAGCCTGTCACGCTGGAGATCGCGGGTTCGAA
TCCCGTCGATCCCGttt
Downstream region at tRNA end position 
ttgccgaggt
Secondary structure (Cloverleaf model)
>WENV170978397	Asp	GTC
                   a      Gttt ttgccgaggt
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | |                 T T
    T       A C A C
      T C A        G     AGATC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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