The detailed information of tRNA gene sequence


Sequence ID>WENV170978411
Genome IDMTKZ01049679
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2339
End posion on genome 2414
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
agctagatat
tRNA gene sequence 
GCACCCGTAGCTCAATTTGGATAGAGCAACACACTCCTAACGTGTAGGTTGTTGGTTCAA
TTCCGACCGGGTGCGCtt
Downstream region at tRNA end position 
tcctactact
Secondary structure (Cloverleaf model)
>WENV170978411	Arg	CCT
                   t      GCtt tcctactact
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     C A G C C     A
    T T A A        A      | | + | |     A
  T         C T C G       G T T G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          A     AGGTT
                    A - T
                    C - G
                    A - T
                    C - G
                    A   C
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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