The detailed information of tRNA gene sequence


Sequence ID>WENV170978415
Genome IDMTKZ01049796
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1133
End posion on genome 1047
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gttcaggcgt
tRNA gene sequence 
GCCGGTGTGGCGGAACTGGTAGACGTGCTCGACTCAAAATCGGGTGCCCGCGAGGGCGTG
TGGGTTCGAGTCCCACCTCCGGCACCA
Downstream region at tRNA end position 
tccatctgtc
Secondary structure (Cloverleaf model)
>WENV170978415	Leu	CAA
                   t      ACCA tccatctgtc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T   T
                     G - C          T G
                    T     C A C C C     A
      C A A        G      | | | | |     G
    T       G G C G       G T G G G     C
    G         | | +                 T T
    G       A C G T
      T A G        G     TGCCCGCGAGGGCGT
                    C - G
                    T + G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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