The detailed information of tRNA gene sequence


Sequence ID>WENV170978423
Genome IDMTKZ01050354
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2186
End posion on genome 2261
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attcgcaccT
tRNA gene sequence 
GGGGTTGTAGCTCAGCTGGTTAGAGTACCTGCCTGTCACGCAGGGGGTCGCGAGTTCGAG
TCTCGTCAACCCCGAtt
Downstream region at tRNA end position 
taaaaaaggc
Secondary structure (Cloverleaf model)
>WENV170978423	Asp	GTC
                   T      GAtt taaaaaaggc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T G
                    T     T G C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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