The detailed information of tRNA gene sequence


Sequence ID>WENV170978425
Genome IDMTKZ01050390
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 108
End posion on genome 198
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggcacgttgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGCCTATTGCGCGCGCTTGGAGAGCGCGTTTGCTACAAAATAGC
AACGGGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttcctatt
Secondary structure (Cloverleaf model)
>WENV170978425	Ser	GGA
                   c      GCCA ttttcctatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    C       T T G C
      C T A        G     TTTGCTACAAAATAGCAAC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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