The detailed information of tRNA gene sequence


Sequence ID>WENV170978428
Genome IDMTKZ01050429
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1345
End posion on genome 1421
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atgattattt
tRNA gene sequence 
GGGGTGGTAGCTCAACTGGTTAGAGCTTTGCACTGTCACTGCAAAGGTTGCGGGTTCGAG
TCCCGTCCACCCCGCCA
Downstream region at tRNA end position 
tattcctttg
Secondary structure (Cloverleaf model)
>WENV170978428	Asp	GTC
                   t      GCCA tattcctttg
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTT
                    T - A
                    T - A
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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