The detailed information of tRNA gene sequence


Sequence ID>WENV170978430
Genome IDMTKZ01050510
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10812
End posion on genome 10888
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggcgctcct
tRNA gene sequence 
GGGCCTGTAGCTTAGCCTGGTAGAGCGCCCGGCTCATAACCGGGCGGCCAAGGGTTCAAA
TCCCTTCGGGCCCACAA
Downstream region at tRNA end position 
gtttctaaat
Secondary structure (Cloverleaf model)
>WENV170978430	Met	CAT
                   t      ACAA gtttctaaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | | | | |     A
    C       T T C G       A A G G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     CGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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