The detailed information of tRNA gene sequence


Sequence ID>WENV170978431
Genome IDMTKZ01050569
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1627
End posion on genome 1700
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
atgtcggaaT
tRNA gene sequence 
GTCCCCATCGTCTAGAGGTTAGGACAGCGGGTTTTCAACCCGCCAACAGGGGTTCGATTC
CCCTTGGGGATATag
Downstream region at tRNA end position 
atggagccat
Secondary structure (Cloverleaf model)
>WENV170978431	Glu	TTC
                   T      ATag atggagccat
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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