The detailed information of tRNA gene sequence


Sequence ID>WENV170978439
Genome IDMTKZ01050845
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12432
End posion on genome 12346
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gaaaaaatgt
tRNA gene sequence 
GCCGAAGTGGTGAAACAGGTAGACGCAGTGGACTCAAAATCCACCGGGCATTAGCCCATG
CCGGTTCGATTCCGGCCTTCGGCACCA
Downstream region at tRNA end position 
gcatatattt
Secondary structure (Cloverleaf model)
>WENV170978439	Leu	CAA
                   t      ACCA gcatatattt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     C G G C C     A
      C A A        G      | | | | |     G
    A       A G T G       G C C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CGGGCATTAGCCCAT
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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