The detailed information of tRNA gene sequence


Sequence ID>WENV170978446
Genome IDMTKZ01050874
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1514
End posion on genome 1439
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
attctttttt
tRNA gene sequence 
GCGCGATTAGTTCATCGGCTTAGAATATCTCGGTGACATCGAGAAGAGACTTGTTCGACA
CAAGTATTGCGCACCA
Downstream region at tRNA end position 
atttatcctt
Secondary structure (Cloverleaf model)
>WENV170978446	Val	GAC
                   t      ACCA atttatcctt
                     G - C
                     C - G
                     G - C
                     C - G
                     G + T
                     A - T
                     T - A          A C
                    T     T G A A C     A
      C T A        A      | | | | |     G
    G       C T T G       A C T T G     C
    G       | | | +                 T T
    C       G A A T
      T T A        A     AGAG
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  G       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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