The detailed information of tRNA gene sequence


Sequence ID>WENV170978454
Genome IDMTKZ01051002
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9933
End posion on genome 9861
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ctccatttgt
tRNA gene sequence 
GCCCACGTAGCTCAGTCGGTAGAGCATTTGCATGGTAAGCAAAAGGTCACCAGTTCGATT
CTGGTCGTGGGCTatg
Downstream region at tRNA end position 
tatccagcgg
Secondary structure (Cloverleaf model)
>WENV170978454	Thr	GGT
                   t      Tatg tatccagcgg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     T G G T C     A
      T G A        A      | | | | |     G
    C       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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