The detailed information of tRNA gene sequence


Sequence ID>WENV170978480
Genome IDMTKZ01051599
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2688
End posion on genome 2773
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttgcacgatg
tRNA gene sequence 
GGAGGGATGGCCGAGCGGCCTATGGCGCCTGTCTTGAAAACAGGTGTGGGGCAACCCACC
GGGGGTTCGAATCCCTCTCCCTCCGCtg
Downstream region at tRNA end position 
aacacttact
Secondary structure (Cloverleaf model)
>WENV170978480	Ser	TGA
                   g      GCtg aacacttact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    C       T G G C
      C T A        G     TGTGGGGCAACCCACC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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