The detailed information of tRNA gene sequence


Sequence ID>WENV170978481
Genome IDMTKZ01051599
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2801
End posion on genome 2892
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aattccatcc
tRNA gene sequence 
GGGGAGGTGCCAGAGAGGCTGATTGGGCTCGCCTGCTAAGTGAGTGCGGGGGTTAAACTC
CGCCGTGGGTTCGAATCCCACCCTCCCCGCCT
Downstream region at tRNA end position 
gaaannnnnn
Secondary structure (Cloverleaf model)
>WENV170978481	Ser	GCT
                   c      GCCT gaaannnnnn
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       + | | |                 T T
    C       T T G G
      T G A        G     TGCGGGGGTTAAACTCCGCC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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