The detailed information of tRNA gene sequence


Sequence ID>WENV170978483
Genome IDMTKZ01051629
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 740
End posion on genome 650
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caaccgattc
tRNA gene sequence 
GGAGGGGTGCCAGAGTGGTTGAATGGGGCGGTCTCGAAAACCGTTGTAGCGTTTATCGCT
ACCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gagtttatga
Secondary structure (Cloverleaf model)
>WENV170978483	Ser	CGA
                   c      GCCA gagtttatga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTAGCGTTTATCGCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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