The detailed information of tRNA gene sequence


Sequence ID>WENV170978493
Genome IDMTKZ01051810
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 599
End posion on genome 675
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catgcgcagt
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTCAGAGCAGCCGACTCATAATCGGCCGGTCGCAGGTTCGAG
TCCTGCTGGGCCCACCA
Downstream region at tRNA end position 
tttgtgccgg
Secondary structure (Cloverleaf model)
>WENV170978493	Met	CAT
                   t      ACCA tttgtgccgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     CGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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