The detailed information of tRNA gene sequence


Sequence ID>WENV170978509
Genome IDMTKZ01052287
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6285
End posion on genome 6209
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cctaattgtt
tRNA gene sequence 
CGGGACGTAGCGCAGCCCGGTAGCGTACCAGCATGGGGTGCTGGGGGTCGCAAGTTCGAA
TCTTGTCGTCCCGACAA
Downstream region at tRNA end position 
attcaaaagg
Secondary structure (Cloverleaf model)
>WENV170978509	Pro	GGG
                   t      ACAA attcaaaagg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T T C     A
      C G A        A      + | | | |     G
    C       C G C G       G C A A G     C
    C       | | | +                 T T
    G       G C G T
      G T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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