The detailed information of tRNA gene sequence


Sequence ID>WENV170978516
Genome IDMTKZ01052598
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3365
End posion on genome 3454
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acttcgtcac
tRNA gene sequence 
GGAGAGGTCGCATAGTTCGGTCTAGTGCGCGCGATTGGAAATCGCGTATCCTGCAAGGGA
TCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tcaagaaacg
Secondary structure (Cloverleaf model)
>WENV170978516	Ser	GGA
                   c      GCCA tcaagaaacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        C      | | | | |     A
  C         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TATCCTGCAAGGGATC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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