The detailed information of tRNA gene sequence


Sequence ID>WENV170978522
Genome IDMTKZ01052768
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1232
End posion on genome 1157
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tagtacgcac
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGGAGAGCGCCGGCTTTGCAAGCCGGAGGTCGTCGGTTCGATC
CCGATCATCTCCACCA
Downstream region at tRNA end position 
cgagacgtcg
Secondary structure (Cloverleaf model)
>WENV170978522	Ala	TGC
                   c      ACCA cgagacgtcg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C T
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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