The detailed information of tRNA gene sequence


Sequence ID>WENV170978523
Genome IDMTKZ01052775
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2408
End posion on genome 2483
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttagaggtgt
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGGAGAGCGCTTGCTTCGCATGTAAGAGGCCAGGGGTTCGATT
CCCCTTATCTCCACCA
Downstream region at tRNA end position 
atatgaaatt
Secondary structure (Cloverleaf model)
>WENV170978523	Ala	CGC
                   t      ACCA atatgaaatt
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     A - T          T T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G + T
                    C - G
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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