The detailed information of tRNA gene sequence


Sequence ID>WENV170978528
Genome IDMTKZ01053051
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2977
End posion on genome 2905
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agcaggcgtg
tRNA gene sequence 
GGGGACGTAGCTCAGCTGGGAGAGCGGTGCCTTTGCAAGGCATAGGTCAGGGGTTCGAGT
CCCCTCGTCTCCAtgg
Downstream region at tRNA end position 
ggtggtggtc
Secondary structure (Cloverleaf model)
>WENV170978528	Ala	TGC
                   g      Atgg ggtggtggtc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G + T
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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