The detailed information of tRNA gene sequence


Sequence ID>WENV170978531
Genome IDMTKZ01053094
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1223
End posion on genome 1147
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tttatttccg
tRNA gene sequence 
GGGCTCATAGCTCAGTTGGTTAGAGCGTTGCATTCACATTGCAAAGGTCTCAGGTTCGAA
TCCTGATGAGCCCACCA
Downstream region at tRNA end position 
aatcaaagtt
Secondary structure (Cloverleaf model)
>WENV170978531	Val	CAC
                   g      ACCA aatcaaagtt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     A G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       T C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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