The detailed information of tRNA gene sequence


Sequence ID>WENV170978534
Genome IDMTKZ01053278
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10128
End posion on genome 10035
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaaaaataac
tRNA gene sequence 
GGAGAGATACCGAAGTGGTCGTAACGGGATCGACTCGAAATCGATTTGGGGGCCAACAGC
TCTCACGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gaatttgcgt
Secondary structure (Cloverleaf model)
>WENV170978534	Ser	CGA
                   c      GCCA gaatttgcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGGGGGCCAACAGCTCTCAC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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