The detailed information of tRNA gene sequence


Sequence ID>WENV170978540
Genome IDMTKZ01053575
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 18580
End posion on genome 18491
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgtagcttt
tRNA gene sequence 
GGAGGGATCGCATAGTGGACTAGTGCGCAGTCCTGGAAAGACTGTATAGGAGTAATCCTA
TCGGGGGTTCGAATCCCCCTCCCTCCGCCA
Downstream region at tRNA end position 
gtaagaacca
Secondary structure (Cloverleaf model)
>WENV170978540	Ser	GGA
                   t      GCCA gtaagaacca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G G G G G     C
    G       + | | |                 T T
    A       G T G C
      C T A        G     TATAGGAGTAATCCTATC
                    C - G
                    A - T
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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