The detailed information of tRNA gene sequence


Sequence ID>WENV170978549
Genome IDMTKZ01053940
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 389
End posion on genome 314
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccaatgcaa
tRNA gene sequence 
GCGGAAGTAGCTCAGCTGGTAGAGCATCACCTTGCTAAGGTGAGGGTCGCCGGTTCGAAT
CCGGTCTTCCGCTCCA
Downstream region at tRNA end position 
atgatctttc
Secondary structure (Cloverleaf model)
>WENV170978549	Ser	GCT
                   a      TCCA atgatctttc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G G C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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