The detailed information of tRNA gene sequence


Sequence ID>WENV170978554
Genome IDMTKZ01054079
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 373
End posion on genome 290
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agaactttac
tRNA gene sequence 
GCCCGTGTAGTGAAACTGGTAAACACAGCGGTCTTGAAAACCGTCTCCCTAGCAGGATTG
TGGGTTCGAGTCCCACCACGGGTAgtt
Downstream region at tRNA end position 
cttgtcatta
Secondary structure (Cloverleaf model)
>WENV170978554	Ser	TGA
                   c      Agtt cttgtcatta
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A
                     G - C          T G
                    T     C A C C C     A
      C A A        A      | | | | |     G
    T       A G T G       G T G G G     C
    G         | | |                 T T
    G       A C A C
      T A A        A     CTCCCTAGCAGGATT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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