The detailed information of tRNA gene sequence


Sequence ID>WENV170978560
Genome IDMTKZ01054381
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1408
End posion on genome 1333
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaaatgaag
tRNA gene sequence 
GGGCCCATAGCTCAATTGGTAGAGCCACCGGCTCATAACCGGTCGGTCCCTGGTTCGAAC
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
gagacgagcg
Secondary structure (Cloverleaf model)
>WENV170978560	Met	CAT
                   g      ACCA gagacgagcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     G G A C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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