The detailed information of tRNA gene sequence


Sequence ID>WENV170978561
Genome IDMTKZ01054589
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1175
End posion on genome 1245
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttttgattac
tRNA gene sequence 
GCCGGGGTTGTCGAGAGGCTCGGCCTCGGACTGCAGATCCGATCACGAGGGTTCAACTCC
CTCCCCCGGCTttg
Downstream region at tRNA end position 
caaaggggac
Secondary structure (Cloverleaf model)
>WENV170978561	Cys	GCA
                   c      Tttg caaaggggac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    T     C T C C C     A
        G A        T      | | | | |     A
      A     G C T G       G A G G G     C
      G     | | + |                 T T
      G     C G G C
        C T        C     TCAC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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