The detailed information of tRNA gene sequence


Sequence ID>WENV170978585
Genome IDMTKZ01054975
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1309
End posion on genome 1385
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attttattgt
tRNA gene sequence 
GGCGGTATAGCTTAGTTGGCTAGAGCGTTCGGTTCATACCCGAAAGGTCACAGGTTCGAC
TCCTGTTACCGCTACCA
Downstream region at tRNA end position 
aataaatgtg
Secondary structure (Cloverleaf model)
>WENV170978585	Met	CAT
                   t      ACCA aataaatgtg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T C
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       T T C G       A C A G G     C
    G       + | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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