The detailed information of tRNA gene sequence


Sequence ID>WENV170978596
Genome IDMTKZ01055465
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3856
End posion on genome 3944
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccgttgcgt
tRNA gene sequence 
GGAGGGGTAGCATAGTTGGCCTAATGCGCGCGTCTCGAAAACGCGTGAGCAGAAATGCTC
CGTGGGTTCGAATCCCACCCCCTCCGCCT
Downstream region at tRNA end position 
gcgggccttt
Secondary structure (Cloverleaf model)
>WENV170978596	Ser	CGA
                   t      GCCT gcgggccttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        A      | | | | |     G
  G         T A C G       G T G G G     C
  G         | | | |                 T T
  C         A T G C
    C T A          G     TGAGCAGAAATGCTCC
                    C - G
                    G - C
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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