The detailed information of tRNA gene sequence


Sequence ID>WENV170978599
Genome IDMTKZ01055534
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2209
End posion on genome 2133
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cccggaaaca
tRNA gene sequence 
CGGGGCGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCACAGGTTCAAA
TCCTGTCGCCCCGACCA
Downstream region at tRNA end position 
tcattcgtcc
Secondary structure (Cloverleaf model)
>WENV170978599	Pro	TGG
                   a      ACCA tcattcgtcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       A C A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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