The detailed information of tRNA gene sequence


Sequence ID>WENV170978603
Genome IDMTKZ01055667
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1167
End posion on genome 1254
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tacgtttttt
tRNA gene sequence 
GGAGCGATGGGTGAGAGGCTTAAACCAGCAGTTTGCTAAACTGCCGTACGGGTAACCGTA
CCGGGGGTTCGAATCCCCCTCTCTCCGCac
Downstream region at tRNA end position 
cacatgaatg
Secondary structure (Cloverleaf model)
>WENV170978603	Ser	GCT
                   t      GCac cacatgaatg
                     G - C
                     G - C
                     A - T
                     G - C
                     C   T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACGGGTAACCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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