The detailed information of tRNA gene sequence


Sequence ID>WENV170978608
Genome IDMTKZ01055911
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1332
End posion on genome 1241
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttcttaaaac
tRNA gene sequence 
GGGAATGGTAAAGTCCCGGTGGGCTTCCTGGTCTTCAAAATCAGTGTCGGGTCGGTAAGA
GCCGTCGTGGGTTCGACTCCCATCCATTCCCGttt
Downstream region at tRNA end position 
attatgaata
Secondary structure (Cloverleaf model)
>WENV170978608	SeC	TCA
                   c      Gttt attatgaata
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        A      + | | | |     G
    G       T G A A       G T G G G     C
    G       + | | |                 T T
    T       G C T T
      G G          C     TGTCGGGTCGGTAAGAGCCGTC
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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