The detailed information of tRNA gene sequence


Sequence ID>WENV170978613
Genome IDMTKZ01056226
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2345
End posion on genome 2434
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcacgcttcc
tRNA gene sequence 
GGAGGGGTGGCCGAGAGGTCGAAGGCAGCGGTCTTGAAAACCGCCATCGGGGTGACTCGT
TCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
catttgcagg
Secondary structure (Cloverleaf model)
>WENV170978613	Ser	TGA
                   c      GCCA catttgcagg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CATCGGGGTGACTCGTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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