The detailed information of tRNA gene sequence


Sequence ID>WENV170978635
Genome IDMTKZ01056878
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5505
End posion on genome 5579
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgctccagcc
tRNA gene sequence 
GCCTCGGTAGCTCAGCCGGTCCAGAGCGATTGACTTGTAATCAATAGGTCGCGTGTTCGA
ATCACGCCCGGGGCTtgt
Downstream region at tRNA end position 
cctggctagg
Secondary structure (Cloverleaf model)
>WENV170978635	Thr	TGT
                   c      Ttgt cctggctagg
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C A C     A
    C C G A        A      | | | | |     G
  G         C T C G       G C G T G     C
  G         | | | |                 T T
  T         G A G C
    C C A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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