The detailed information of tRNA gene sequence


Sequence ID>WENV170978638
Genome IDMTKZ01056965
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3424
End posion on genome 3340
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttcgtaaaaa
tRNA gene sequence 
GGAGGATTCGCATAATGGTATTGCAGCGGTCTTGAAAACCGCCGGGCGCAAGCCTGTGGG
GGTTCGAGTCCCTCATCCTCCGCAA
Downstream region at tRNA end position 
atacggggaa
Secondary structure (Cloverleaf model)
>WENV170978638	Ser	TGA
                   a      GCAA atacggggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     C T C C C     A
        A A        C      | + | | |     G
      T     T A C G       G G G G G     C
      G       | | |                 T T
      G     T T G C
        T A        A     CGGGCGCAAGCCTGT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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