The detailed information of tRNA gene sequence


Sequence ID>WENV170978644
Genome IDMTKZ01057230
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1459
End posion on genome 1544
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaacaattt
tRNA gene sequence 
GGAGGGGTCGGATAGTGGTTCATTCCACAGACCTGGAAAGTCTGCGGCTCACAAGGCCTC
GCGGGTTCGAATCCCGCCCCCTCCGCtt
Downstream region at tRNA end position 
attgtcgtga
Secondary structure (Cloverleaf model)
>WENV170978644	Ser	GGA
                   t      GCtt attgtcgtga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T A G G       G C G G G     C
    G         | | |                 T T
    T       T T C C
      T C A        A     CGGCTCACAAGGCCTC
                    C - G
                    A - T
                    G - C
                    A - T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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