The detailed information of tRNA gene sequence


Sequence ID>WENV170978647
Genome IDMTKZ01057294
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 121
End posion on genome 208
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctctttctat
tRNA gene sequence 
GGAGGGATGGCCGAGCGGCTCAAGGCGCCTGTCTTGAAAACAGGTATAGGGAAACCTATC
GTGGGTTCGAATCCCACTTCCTCCGCCA
Downstream region at tRNA end position 
ggcttaacaa
Secondary structure (Cloverleaf model)
>WENV170978647	Ser	TGA
                   t      GCCA ggcttaacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T C A        G     TATAGGGAAACCTATC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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