The detailed information of tRNA gene sequence


Sequence ID>WENV170978648
Genome IDMTKZ01057294
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 229
End posion on genome 320
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctaacattt
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGACGATCGGGGCCGCCTGCTAAGTGGTTGTCGGAGTAAAATCC
GACCCAGGGTTCGAATCCCTGCCTCTCCGCCT
Downstream region at tRNA end position 
aaaaaagaac
Secondary structure (Cloverleaf model)
>WENV170978648	Ser	GCT
                   t      GCCT aaaaaagaac
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G       +   | |                 T T
    A       T C G G
      C G A        G     TGTCGGAGTAAAATCCGACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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