The detailed information of tRNA gene sequence


Sequence ID>WENV170978651
Genome IDMTKZ01057324
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4638
End posion on genome 4728
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagaacatcc
tRNA gene sequence 
GGGGAGATGCCGGAGTGGACGAACGGAGCCGCCTGCTAAGCGGTTGTCCGCCTAAAAAGT
GGACCCAGGGTTCGAATCCCTGTCTCCCCGCtc
Downstream region at tRNA end position 
cacaaaaaaa
Secondary structure (Cloverleaf model)
>WENV170978651	Ser	GCT
                   c      GCtc cacaaaaaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    A       A C G G
      C G A        A     TGTCCGCCTAAAAAGTGGACC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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