The detailed information of tRNA gene sequence


Sequence ID>WENV170978675
Genome IDMTKZ01058039
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2483
End posion on genome 2410
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cgggtggggc
tRNA gene sequence 
GCCCCAATAGCTCAGTCGGCAGAGCGTTTCCATGGTAAGGAAAAGGTCTAGGGTTCGATT
CCCTATTGGGGCTCgg
Downstream region at tRNA end position 
gatcaggcat
Secondary structure (Cloverleaf model)
>WENV170978675	Thr	GGT
                   c      TCgg gatcaggcat
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T          T T
                    T     A T C C C     A
      T G A        A      | | | | |     G
    C       C T C G       T A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T - A
                    T - A
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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