The detailed information of tRNA gene sequence


Sequence ID>WENV170978676
Genome IDMTKZ01058039
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2381
End posion on genome 2307
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggatcgccac
tRNA gene sequence 
GGCGGGATAGCTCAGTTGGTCAGAGCGCACGACTCATAATCGTGAGGTCGCGGGATCGAG
CCCCGCTCCCGCTACtg
Downstream region at tRNA end position 
ctccggtgag
Secondary structure (Cloverleaf model)
>WENV170978676	Met	CAT
                   c      ACtg ctccggtgag
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          C G
                    T     C G C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 A T
    G       G A G C
      T C A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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