The detailed information of tRNA gene sequence


Sequence ID>WENV170978678
Genome IDMTKZ01058117
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5390
End posion on genome 5304
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tggcgagcct
tRNA gene sequence 
GGAGAGGTCGCATAGTTTGGTCTAGTGCGCACGATTGGAAATCGTGTAGGCGATGAGCCT
CGCGGGTTCAAATCCCGCCCTCTCCGCtg
Downstream region at tRNA end position 
gttggatggg
Secondary structure (Cloverleaf model)
>WENV170978678	Ser	GGA
                   t      GCtg gttggatggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T T G A        C      | | | | |     A
  T         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TAGGCGATGAGCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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