The detailed information of tRNA gene sequence


Sequence ID>WENV170978682
Genome IDMTKZ01058169
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1096
End posion on genome 1007
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcaattgct
tRNA gene sequence 
GGAGAGATGTCTGAGTGGTCGAAAGAGACGGTCTTGAAAACCGTTATACAGGTTTCTGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gtaatttgat
Secondary structure (Cloverleaf model)
>WENV170978682	Ser	TGA
                   t      GCCA gtaatttgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G T G G G     C
    G         | | |                 T T
    T       A A G A
      C G A        G     TATACAGGTTTCTGTATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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