The detailed information of tRNA gene sequence


Sequence ID>WENV170978695
Genome IDMTKZ01058437
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5003
End posion on genome 4913
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tctgtagggt
tRNA gene sequence 
GGAGAGATGGCCGAGAGGCCGAAGGCGCGTGCCTGCTAAGCACGTGAGGGTGTTTAACCC
TCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttctattatt
Secondary structure (Cloverleaf model)
>WENV170978695	Ser	GCT
                   t      GCCA ttctattatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TGAGGGTGTTTAACCCTCC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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