The detailed information of tRNA gene sequence


Sequence ID>WENV170978699
Genome IDMTKZ01058492
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4216
End posion on genome 4305
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcaaaaaaac
tRNA gene sequence 
GGAGGCGTGTTCCGAACTGGCTAAGGGGCCGGTCTCGAAAACCGGTGAGCATATTTGCTC
GTGTGGGTTCGAATCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
tctcattttt
Secondary structure (Cloverleaf model)
>WENV170978699	Ser	CGA
                   c      GCCA tctcattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C A A G        G      | | | | |     G
  T         C C T T       G T G G G     C
  G           | + +                 T T
  G         A G G G
    C T A          G     TGAGCATATTTGCTCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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