The detailed information of tRNA gene sequence


Sequence ID>WENV170978708
Genome IDMTKZ01058753
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1160
End posion on genome 1234
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataaaaaaaT
tRNA gene sequence 
GCGCCTGTAGTTCAAACGGAAGAATACGTTCATGCTAAGTTCGAGGTTGAGGGTTCAAGT
CCCTCCAGGCGCAAgt
Downstream region at tRNA end position 
aaatattcac
Secondary structure (Cloverleaf model)
>WENV170978708	Ser	GCT
                   T      AAgt aaatattcac
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
      A A A        A      | | | | |     A
    C       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      A A          A     AGGTT
                    C - G
                    G - C
                    T   T
                    T   T
                    C - G
                  A       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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