The detailed information of tRNA gene sequence


Sequence ID>WENV170978736
Genome IDMTKZ01060024
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1608
End posion on genome 1534
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctaactcgat
tRNA gene sequence 
GCCCCTATTGTCTAGTGGTTAGGACGCAGCCCTTTCAAGGCTAAAACCCGGGTTCGAATC
CCGGTAGGGGCACCA
Downstream region at tRNA end position 
gaaacttcgc
Secondary structure (Cloverleaf model)
>WENV170978736	Glu	TTC
                   t      ACCA gaaacttcgc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     G G C C C     A
      T G A        T      | | | | |     G
    G       T C T G       C C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C   A
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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